BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011C08LP1|AL426184
(789 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1249 1564 0.0
>3x_Contig1249
Length = 5939
Score = 1564 bits (789), Expect = 0.0
Identities = 789/789 (100%)
Strand = Plus / Plus
Query: 1 acgttaatattgatgaatacgtcataaacagcaagtaccatttcattgccagacaatttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3772 acgttaatattgatgaatacgtcataaacagcaagtaccatttcattgccagacaatttg 3831
Query: 61 aggttaatccgacttctaaacggatttatcatacctttgacgacataaaagaaaccaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3832 aggttaatccgacttctaaacggatttatcatacctttgacgacataaaagaaaccaaca 3891
Query: 121 agctaatgaacccgtaaatatgtatatattcgcatttgttatagcaagaatgatcatgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3892 agctaatgaacccgtaaatatgtatatattcgcatttgttatagcaagaatgatcatgat 3951
Query: 181 tattttgttgaatatgattcaattgttgaattgaactacttaaaaaatatacgaaaagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3952 tattttgttgaatatgattcaattgttgaattgaactacttaaaaaatatacgaaaagag 4011
Query: 241 atgctatttatacatatcatcaattagataaaagagataccatttgttgaaaattagaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4012 atgctatttatacatatcatcaattagataaaagagataccatttgttgaaaattagaac 4071
Query: 301 ccaagttgataaaaaagagtgtgaattgcaattggtattacggatcatcaatttgttgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4072 ccaagttgataaaaaagagtgtgaattgcaattggtattacggatcatcaatttgttgga 4131
Query: 361 tgtccataagaattgaaataggatagtcattattacagtgtggaaaggaaagaaaacaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4132 tgtccataagaattgaaataggatagtcattattacagtgtggaaaggaaagaaaacaag 4191
Query: 421 tgtctgtcaaatattttttaatccaagttcgtttacactggcaatgggaattcaccggcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4192 tgtctgtcaaatattttttaatccaagttcgtttacactggcaatgggaattcaccggcc 4251
Query: 481 cattggtagatttcgttcttcaattgggtcaattcttcagaaccttcgttgaccttagcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4252 cattggtagatttcgttcttcaattgggtcaattcttcagaaccttcgttgaccttagcc 4311
Query: 541 ttgaagtccttcaatttgttggcttcctttggcaaagattgttgagtcttagcagcaaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4312 ttgaagtccttcaatttgttggcttcctttggcaaagattgttgagtcttagcagcaaat 4371
Query: 601 tgaacggccttgtcaatgtagtcgacgattctagcgaattctggttcaccgaaacctcta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4372 tgaacggccttgtcaatgtagtcgacgattctagcgaattctggttcaccgaaacctcta 4431
Query: 661 gtagtcatagctggagcaccgatacggacaccacctgggaccaaagcagatttgtcacct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4432 gtagtcatagctggagcaccgatacggacaccacctgggaccaaagcagatttgtcacct 4491
Query: 721 gggatagagttcttgttcaaagcgatgttgatgttttcacaaacgtattcgacacgagca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4492 gggatagagttcttgttcaaagcgatgttgatgttttcacaaacgtattcgacacgagca 4551
Query: 781 ccatcgaca 789
|||||||||
Sbjct: 4552 ccatcgaca 4560
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7655
Number of Sequences: 1807
Number of extensions: 7655
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 1
length of query: 789
length of database: 10,358,551
effective HSP length: 16
effective length of query: 773
effective length of database: 10,329,639
effective search space: 7984810947
effective search space used: 7984810947
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)